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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788910.1_cds_XP_016488981.1_752
CDS Infomation

[gene=LOC107808902] [db_xref=GeneID:107808902] [protein=putative E3 ubiquitin-protein ligase XBAT31] [protein_id=XP_016488981.1] [location=join(3304..3486,3706..3765,3956..4027,4120..4241,4423..4563,4643..4750,5574..5832,6462..6863)] [gbkey=CDS]
Sequence

ATGGGGCAGAAATTGAGTTGTGTACAGCAACCCCATGAACATGGACTGTTCAGTGCAGTC
CAAAATGGTGAGCTTGAAAAAGTTGAAGCTATGATTAATGAAGACCCAAATGTGCTTCAT
TTTACCAGTGTTCGTGGGAAGCTCTCTGCACTTCATGTTGCTGCTGCTAATGGACAGATC
GAGGTGCTATCTGTGCTCTTGGATCGTGGGGTTAATCCAGACATTTTGAATCGCCATAAA
CAGACCCCATTAATGTTAGCTGCTATGCATGGAAATGTGTCCTGCGTGGAGAGATTAATT
CAGCGAGGTGCTAATATTTTAACGTTTGATTCACTACATGGAAGAACCTGTTTGCATTAT
GCCGCTTACCATGGCCATTCTGACTGCCTGCAATCGATCCTTGCATCCGCTCATTCGGCA
CCTGTTGCTCAATCTTGGGGATTTGCGAGATTTGTGAACATAGGAGATGGAAGTGGTGCA
ACTCCATTGCACTTGGCAGCCCGTCATGGTAGACCAGGATGTGTCCGGATTCTTCTAAGC
AATGAGGCTCTTGTCTGTGTTTCTACTGGTGGCTATGGTCGTCCAGGAAGTACACCACTG
CATTTGGCAGCTCGAGGGGGTTCTTTGGATTGTGTGCGGGAGTTACTTGCTTGGGGTGCA
GATCGACTTCAGAGAGATTCTTCTGGGCGAATACCTTACTTAGTTGCTTTGAAGTACAAG
CATGAAGCATGTGGTGCTCTCTTAAATCCATCATCTCCAGAGCCTTTGACCTGGCCTTCG
CCTTTGAAGTTCATTACTGAGCTTGATGCCGAAGCAAAAGTTTTACTAGAGAATGCTCTT
ATTGAGGCGAACAAAGATAGAGAGAAGTTGATATTGAAAAAGATAGATGTCTCACTTACA
TCACCTTTGCATTGTGATTCTGGCCTTGAGAGTGATGACTTTGAGGGCAGTGATTTTGAG
CTGTGTTGCATATGCTTTGAGCATTCCTGCACAATTGAGATTAAAAAATGTGGCCATCAG
ATGTGTGCTCATTGCACTCTAGCCTTATGTTGTCACAATAAGCCCAATCCTACAAGTAAC
AGTGAGAAGGTTCCTGTATGCCCCTTTTGCCGGAGCGATATCACTCATTTAGTCGTGGTC
CAGAATAAAATAGACAGTTACGACGAGGAATTGAGTCCCTCACGGCCAAGAAAATCAAGA
ACATCTTTCAGTCTTACTGAAGGTGGCAGCAGCAGCAGCAGTAACAGCTTGAGAGTTTTG
TCACCCTTAGCCTCATTCGGGAAGTTGGGTGGTCGCCATTCAGGCAAAATTAGTGCAGAA
TGCATTGAAGTGTTTGCCAAGCCTTAA

Peptide Sequence

PEP ID

XP_016488981.1
PEP Infomation

PREDICTED: putative E3 ubiquitin-protein ligase XBAT31 [Nicotiana tabacum]
Sequence

MGQKLSCVQQPHEHGLFSAVQNGELEKVEAMINEDPNVLHFTSVRGKLSALHVAAANGQI
EVLSVLLDRGVNPDILNRHKQTPLMLAAMHGNVSCVERLIQRGANILTFDSLHGRTCLHY
AAYHGHSDCLQSILASAHSAPVAQSWGFARFVNIGDGSGATPLHLAARHGRPGCVRILLS
NEALVCVSTGGYGRPGSTPLHLAARGGSLDCVRELLAWGADRLQRDSSGRIPYLVALKYK
HEACGALLNPSSPEPLTWPSPLKFITELDAEAKVLLENALIEANKDREKLILKKIDVSLT
SPLHCDSGLESDDFEGSDFELCCICFEHSCTIEIKKCGHQMCAHCTLALCCHNKPNPTSN
SEKVPVCPFCRSDITHLVVVQNKIDSYDEELSPSRPRKSRTSFSLTEGGSSSSSNSLRVL
SPLASFGKLGGRHSGKISAECIEVFAKP

Transcript Sequence

Gene sequence data has not been registered.